Hey, so I've finally found a way to describe all of my favorite games without putting it into a list of only ten. Tiers are now the new top ten. So here it goes.
Tier 1: Skyward Sword, Ocarina of Time, San Andreas, Resident Evil 4, Okami, Halo 4, The Legend of Dragoon, Final Fantasy VII
Tier 2: Twilight Princess, The Wind Waker, Pokemon Gold, SSB Melee, The Last Story, Halo Reach, Halo 2, The Thousand Year Door, Yoshi's Island
Tier 3: Dark Dawn, Link's Awakening, Halo 3, Halo CE, Super Mario Galaxy 2, Pikmin 2, Conker's Bad Fur Day, Paper Mario, Yoshi's Island DS
Tier 4: Cave Story 3D, Pikmin, RE Revelations, Mafia II, LA Noire, Bowser's Inside Story, Super Paper Mario
This is it as of now, but I will keep modifying the list as time goes on.